Introduction

If you're reading this, you probably noticed something worrying after going to the toilet — blood, pain, or both — and you've landed on these two conditions as possible explanations. They're very easy to confuse, and that confusion matters because the treatment for one doesn't work for the other. An anal fissure is a small tear in the lining of your anal canal, and its defining feature is pain. An internal haemorrhoid is an enlarged blood vessel cushion, and its defining feature is bleeding or prolapse — usually without much pain at all.

The single most useful clue before you see anyone is pain. If going to the toilet is genuinely painful, and the pain lingers for a long time afterwards — sometimes an hour or more — an anal fissure is most likely what you're dealing with. If you're seeing blood but there's little or no pain, internal haemorrhoids are the more likely culprit.

What are these conditions?

Anal fissure

An anal fissure is a small tear in the lining of the anal canal — almost always at the back midline (what surgeons call the 6 o'clock position). The area is packed with pain-sensing nerves, so even a tiny tear hurts a lot. Every time you pass a bowel motion, the tear gets disturbed again, and the muscle around the anus goes into spasm in response. That spasm actually reduces blood flow to the area, which is why fissures can stubbornly refuse to heal on their own for months or even years if they're not properly treated.

Haemorrhoids

Haemorrhoids are enlarged blood vessel cushions inside and around the anal canal. The internal ones — the most common type — sit high enough up that there are no pain-sensing nerves there, which is why they tend to bleed without hurting. Their main symptoms are bleeding, a lump that comes out after a bowel motion (prolapse), mucous discharge, and itching. External haemorrhoids are lower down, covered by skin that does have pain nerves, so they can be sore — especially if a blood clot forms inside one (called a thrombosis). The key takeaway: if you have internal haemorrhoids, pain is not usually part of the picture.

Comparing symptoms

Anal fissure

Pain is the defining feature

  • Severe, sharp pain during bowel motion
  • Burning/throbbing ache lasting 30 min – several hours after
  • Small streak of bright red blood on paper
  • Dread and avoidance of going to the toilet
  • Located at the anal opening, not inside
  • No prolapsing tissue
Internal haemorrhoids

Bleeding without significant pain

  • Bright red blood on paper or in bowl
  • Tissue coming down (prolapse) after a motion
  • Mucous discharge and perianal itch
  • Sensation of fullness or incomplete emptying
  • Generally painless (unless prolapsed/strangulated)
  • Blood may be larger in volume than with fissure
💡

A simple rule to remember: If your main symptom is severe pain during or after a bowel motion — think fissure first. If your main symptom is bleeding without much pain — think haemorrhoids first. If you have both pain and noticeable bleeding, it's worth seeing a specialist, as you may have both conditions at the same time — which is more common than you'd think.

Causes

Why fissures occur

Fissures are usually caused by the anal canal being stretched too much — most often by a hard or large stool passing through. Bouts of diarrhoea can also cause them, as can childbirth. The back midline of the anal canal (where fissures almost always happen) has slightly less blood supply than other areas, which is part of why it heals poorly once injured.

Why haemorrhoids occur

Haemorrhoids develop when the connective tissue and ligaments that hold the blood vessel cushions in place gradually weaken. Chronic straining, pregnancy, and a low-fibre diet that produces hard stools are the main triggers. Unlike a fissure, a haemorrhoid isn't a wound — it's more of a structural change in normal tissue. That's why haemorrhoids are treated with procedures that cut off their blood supply or remove the tissue (rubber band ligation, surgery), while fissures are treated with things that relax the muscle and improve healing.

When to worry

  • You have noticeable bleeding combined with severe pain — you may have both a fissure and haemorrhoids at the same time, or something else that needs checking
  • Your symptoms haven't improved after 4–6 weeks of conservative management
  • You have swelling, redness, or a fever around that area — this can be a sign of an abscess that needs prompt attention
  • Your fissure is not at the back midline — fissures in unusual positions can indicate Crohn's disease or another underlying condition
  • You're over 40 and have rectal bleeding without a recent colonoscopy — it's worth ruling out other causes

Treatment — why it differs so much

This is really why the diagnosis matters. If you have a fissure and you're using haemorrhoid cream, you might get a little surface relief, but you're not touching the real problem — the muscle spasm that's stopping the tear from healing. And if you're treating a haemorrhoid with fissure cream designed to relax a sphincter, you're not addressing the blood vessel enlargement at all. The treatments genuinely don't cross over.

Treating anal fissures

The first step is always softening your stools and taking warm sitz baths (sitting in a few centimetres of warm water for 10–15 minutes) — simple things that work well for fresh fissures. If your fissure has been around for more than 6–8 weeks, your doctor will likely prescribe a topical cream (diltiazem 2% or glyceryl trinitrate) that relaxes the muscle and improves healing, used twice daily for about 8–10 weeks. If that doesn't work, botulinum toxin (Botox) injected into the sphincter during a short day procedure has excellent results. The final step — lateral internal sphincterotomy — is a small surgical procedure for the cases that haven't responded to anything else, and it has a very high cure rate.

Treating haemorrhoids

Haemorrhoid treatment moves from dietary and lifestyle changes → rubber band ligation (banding) → surgical haemorrhoidectomy, depending on how severe your haemorrhoids are. Banding is a simple clinic procedure — no anaesthetic needed — and it works well for most grades of internal haemorrhoids. Surgery is reserved for the more severe or persistent cases.

The bottom line: the treatments for these two conditions are different because the conditions themselves are different. Getting the right diagnosis makes all the difference.

Can you have both at the same time?

Yes — and it happens more often than you might expect. If you've had haemorrhoids for a while and then pass a hard stool, you can develop a fissure on top of the existing haemorrhoids. The haemorrhoids cause the bleeding; the fissure causes the pain. When both are present, the fissure is usually treated first — it needs to heal before a proper examination can be done and before the haemorrhoids can be addressed. Your surgeon will work through this in the right order for your situation.

When surgery is needed

For fissures: surgery (lateral internal sphincterotomy) is the next step when topical creams and botulinum toxin injections haven't produced healing. It's a highly effective day procedure and most people feel a significant difference quickly.

For haemorrhoids: surgery (haemorrhoidectomy) is used for Grade IV haemorrhoids, Grade III ones that haven't responded to banding, and larger external haemorrhoids. Both operations are planned procedures — nothing urgent — and can be scheduled around your life.

Frequently asked questions

My GP told me I have haemorrhoids, but I have a lot of pain. Could it actually be a fissure?

Quite possibly. Haemorrhoids often get assumed as the explanation for perianal symptoms without a thorough examination. Significant pain during or after going to the toilet is not typical of internal haemorrhoids. If pain is your main symptom, it's really worth asking your GP to look specifically for a fissure — or asking for a referral to a colorectal surgeon who can do a proper assessment in the right conditions.

I've been using haemorrhoid cream for weeks and the pain hasn't improved. What should I do?

If haemorrhoid cream isn't helping, there's a good chance the diagnosis is wrong or incomplete. A specialist assessment will sort out whether you actually have a fissure, both a fissure and haemorrhoids, or something else. Fissures have very effective treatments — they're just completely different from haemorrhoid treatments.

Do fissures and haemorrhoids require the same diet changes?

Yes — this is actually the one area where they overlap completely. For both conditions, a high-fibre diet and drinking enough water are essential. Soft, easy-to-pass stools mean less straining and less trauma, which benefits both fissure healing and haemorrhoid management. Think of fibre and hydration as the foundation for everything else.

Is the bleeding from a fissure different from haemorrhoid bleeding?

Usually, yes. Fissure bleeding tends to be a small smear or streak of bright red blood on the paper — there's not much of it, because a tear doesn't hold as much blood as an enlarged vessel. Haemorrhoid bleeding is often more like a drip or splash into the bowl and can look more alarming in volume. That said, neither the colour nor the amount is a reliable way to make a firm diagnosis on your own — a proper examination is the only way to know for sure.

Will a fissure go away on its own?

A fresh fissure — one that's only been there a week or two — has about a 50% chance of healing on its own with soft stools and sitz baths. But a chronic fissure (one that's been hanging around for more than 6–8 weeks, with fibrous, hardened edges) very rarely heals without specific treatment. The longer it's been there, the more likely you'll need a cream, Botox, or occasionally surgery to sort it out properly.

Not sure which one you're dealing with?

That's completely understandable — they can be hard to tell apart without an examination. To discuss your symptoms with Mr Nguyen, call our rooms on (03) 9816 3951 or ask your GP for a referral. Send an enquiry →